ProteomeXchange Datasets Overview

Below is a listing of publicly accessible ProteomeXchange datasets. You can use the search box or interactive graphics to filter the list.
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Dataset Identifier Title Repos Species Instrument Publication LabHead Announce Date Keywords
PXD033492 Fight-or-flight responses require augmentation of Ca2+ influx via Rad phosphorylation PRIDE Mus musculus Orbitrap Fusion Lumos Dataset with its publication pending Steven O. Marx 2022-09-26 Cardiovascular (B/D-HPP), Biology/Disease-Driven Human Proteome Project (B/D-HPP), adrenergic, heart, calcium, ion channels, phosphorylation, contractility, PKA, mass spectrometry, phosphatases,
PXD031451 Immunopeptidomics-based design of highly effective mRNA vaccine formulations against Listeria monocytogenes PRIDE Listeria monocytogenes EGD, Homo sapiens Q Exactive HF; Orbitrap Fusion Lumos Dataset with its publication pending Francis Impens 2022-09-26 Human Immuno-Peptidome Project (HUPO-HIPP) (B/D-HPP), Q Exactive HF, Fusion Lumos, immunopeptidomics, antigen discovery, epitope discovery, Listeria monocytogenes, bacterial infection, vaccine development, H
PXD031210 ╬▓-adrenergic signaling-regulated MYPT1-PP1╬▓ phosphatase bridges chromatin states and actomyosin-tension-mediated YAP/TAZ transcriptional network for beige adipogenesis under cold stress jPOST Mus musculus instrument Dataset with its publication pending Juro Sakai 2022-09-26 Phosphatase, Epigenome, beige adipocyte,
PXD033668 Top-Down proteomics and Bottom-Up terminomics for the Detection of Protein Termini in C. elegans PRIDE Caenorhabditis elegans Orbitrap Fusion Lumos; Q Exactive 10.1021/ACS.JPROTEOME.2C00277 Andreas Tholey 2022-09-26 C. Elegans, Orbitrap Fusion Lumos, Orbitrap Q Exactive Plus, ProSight, GELFrEE, Informed Proteomics, MSPathFinder, Top-Down Proteomic, Bottom-Up Proteomics,
PXD034353 Passive elution of proteoforms from polyacrylamide gels combined with anion exchange purification for in-depth top-down analysis of the human low molecular weight proteome. PRIDE Homo sapiens Orbitrap Fusion Lumos 10.1021/ACS.ANALCHEM.2C02777 Andreas Tholey 2022-09-26 Top-down, PEPPI, SDS-PAGE, Anion Exchange, StageTip,
PXD035978 Campylobacter jejuni MOMP carbene footprinting PRIDE Campylobacter jejuni subsp. jejuni NCTC 11168-PO LTQ FT 10.1016/J.CSBJ.2022.09.032 Neil J. Oldham 2022-09-26 Campylobacter jejuni, LC-MS/MS, carbene footprinting,
PXD034435 Gigartina pilot scale protein extract BUP PRIDE Solanum tuberosum Q Exactive HF 10.1016/J.FUFO.2022.100189 Michael Toft Overgaard 2022-09-26 Gigartina, Seaweed, Rhodophyta, Alternative Food Protein,
PXD022533 SubCellBarCode: Integrated workflow for robust classification and visualization of spatial proteome jPOST Homo sapiens Q Exactive Arslan et al. (2022) Janne Lehti÷ 2022-09-26 Subcellular fractionation, Protein localization, Proteomics, Mass spectrometry, Classification, Visualization,
PXD033573 Molecular mechanism of protein dynamic change in Pacific oyster (Crassostrea gigas) during depuration at different salinities uncovered by mass spectrometry-based proteomics combined with bioinformatics iProX Crassostrea gigas TripleTOF 5600 Chen et al. (2022) Zhaojie Li 2022-09-26 Pacific oyster (Crassostrea gigas), Depuration, Salinity, Proteomics, SWATH-MS,
PXD033701 Placental proteome Analysis in women with intrahepatic cholestasis of pregnancy by LC-MS/MS iProX Homo sapiens Orbitrap Fusion Zhang et al. (2013) Gu Wei 2022-09-26 intrahepatic cholestasis of pregnancy, Placental, proteome, LC-MS/MS,
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