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DataSet Summary

  • HostingRepository: PRIDE
  • AnnounceDate: 2014-07-28
  • AnnouncementXML: Submission_2014-07-28_00:50:38.xml
  • DigitalObjectIdentifier: http://dx.doi.org/10.6019/PXD000579
  • ReviewLevel: Peer-reviewed dataset
  • DatasetOrigin: Original data
  • RepositorySupport: Supported dataset by repository
  • PrimarySubmitter: Sergio Ciordia Higuera
  • Title: A proteome reference map of the wine lactic acid bacterium Oenococcus oeni ATCC BAA-1163
  • Description: Oenococcus oeni is the main lactic acid bacterium that carries out the malolactic fermentation in virtually all red wines and in some white and sparkling wines. O. oeni possesses an array of metabolic activities which can modify the taste and aromatic properties of wine. There is therefore industrial interest in the proteins involved in these metabolic pathways and related transport systems of this bacterium. In this work, we report the characterization of the O. oeni ATCC BAA-1163 proteome. Total and membrane protein preparations from O. oeni were standardized and analyzed by two-dimensional gel electrophoresis. Using tandem mass spectrometry we identified 226 different polypeptides corresponding to 155 unique proteins, which have been classified by their putative function and subjected to bioinformatics analysis.
  • SpeciesList: scientific name: Oenococcus oeni; NCBI TaxID: 1247;
  • ModificationList: monohydroxylated residue; iodoacetamide derivatized residue
  • Instrument: instrument model: 4800 Plus MALDI TOF/TOF

Dataset History

VersionDatetimeStatusChangeLog Entry
02013-11-13 02:18:41ID requested
12014-04-16 13:53:11announced
22014-07-28 00:50:39announcedUpdated project metadata.

Publication List

  1. Mohedano Mde L, Russo P, de Los Ríos V, Capozzi V, Fernández de Palencia P, Spano G, López P, A partial proteome reference map of the wine lactic acid bacterium Oenococcus oeni ATCC BAA-1163. Open Biol, 4():130154(2014) [pubmed]

Keyword List

  1. submitter keyword: Oenococcus oeni, MALDI, MIAPE

Contact List

    Sergio Ciordia Higuera
    • contact affiliation: Proteomics Unit
    • contact email: proteomics.masas@cnb.csic.es
    • dataset submitter:

Full Dataset Link List

  1. Dataset FTP location
  2. PRIDE project URI
Repository Record List
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