PXD002105 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | California sea lion cerebrospinal fluid LC-MS/MS |
Description | We conducted a pilot label-free LC-MS/MS study to profile and compare the cerebral spinal fluid from California sea lions with domoic acid toxicosis and without domoic acid toxicosis. CSF samples from a 8 animals with DAT and 3 controls were run on a nano LC-MS/MS (Triple TOF) and searched against a mammalian database. |
HostingRepository | PRIDE |
AnnounceDate | 2015-09-21 |
AnnouncementXML | Submission_2015-09-21_06:54:46.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD002105 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Benjamin Neely |
SpeciesList | scientific name: Zalophus californianus (California sealion); NCBI TaxID: 9704; |
ModificationList | Oxidation; Carbamidomethyl; Deamidated |
Instrument | TripleTOF 5600 |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2015-04-27 02:46:06 | ID requested | |
⏵ 1 | 2015-09-21 06:54:47 | announced | |
Publication List
Neely BA, Soper JL, Gulland FM, Bell PD, Kindy M, Arthur JM, Janech MG, Proteomic analysis of cerebrospinal fluid in California sea lions (Zalophus californianus) with domoic acid toxicosis identifies proteins associated with neurodegeneration. Proteomics, 15(23-24):4051-63(2015) [pubmed] |
Keyword List
curator keyword: Biomedical, Biological |
submitter keyword: California sea lion, cerebrospinal fluid, domoic acid |
Contact List
Michael G. Janech |
contact affiliation | Department of Medicine, Division of Nephrology, and Marine Biomedicine and Environmental Sciences, Medical University of South Carolina, Charleston, SC, USA |
contact email | janechmg@musc.edu |
lab head | |
Benjamin Neely |
contact affiliation | Medical University of South Carolina |
contact email | benaneely@gmail.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2015/09/PXD002105 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD002105
- Label: PRIDE project
- Name: California sea lion cerebrospinal fluid LC-MS/MS