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PXD019900-1

PXD019900 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleGrad-seq shines light on unrecognized RNA and protein complexes in the model bacterium Escherichia coli
Description22 total proteome samples from E. coli wild type resolved on a glycerol gradient resulting in 20 fractions and a pellet fraction. A lysate sample is given as input control. Further, 2 affinity purification samples comparing YggL-3xFLAG pulldown vs. the wild type is given. In this case, each sample was run on a gel and the lanes cut into 15 gel pieces each.
HostingRepositoryPRIDE
AnnounceDate2020-08-10
AnnouncementXMLSubmission_2020-08-10_01:50:01.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterJens Hör
SpeciesList scientific name: Escherichia coli; NCBI TaxID: 562;
ModificationListNo PTMs are included in the dataset
InstrumentOrbitrap Fusion
Dataset History
RevisionDatetimeStatusChangeLog Entry
02020-06-19 03:06:19ID requested
12020-08-10 01:50:01announced
Publication List
Dataset with its publication pending
Keyword List
submitter keyword: Grad-seq, sRNA, RBP, interactome, complexome
Contact List
Jörg Vogel
contact affiliationHelmholtz Institute for RNA-based Infection Research (HIRI), Helmholtz Centre for Infection Research (HZI), D-97080 Würzburg, Germany Institute of Molecular Infection Biology, University of Würzburg, D-97080 Würzburg, Germany
contact emailjoerg.vogel@uni-wuerzburg.de
lab head
Jens Hör
contact affiliationUniversity of Würzburg
contact emailjens.hoer@uni-wuerzburg.de
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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